STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000002402Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
tekt3
Tektin 3.
   
   0.722
klhdc8b
Kelch domain containing 8B.
      
 0.670
rrp36
Ribosomal RNA processing 36.
      
 0.670
tcte1
T-complex-associated-testis-expressed 1.
    
   0.654
cdadc1
Cytidine and dCMP deaminase domain containing 1.
      
 0.625
LOC103464606
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.600
kcng3
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.593
trappc6a
Trafficking protein particle complex 6b-like.
      
 0.593
TOGARAM1
TOG array regulator of axonemal microtubules 1.
      
 0.593
rerg
RAS like estrogen regulated growth inhibitor.
      
 0.582
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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