Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464600Uncharacterized protein. (905 aa)    
Predicted Functional Partners:
tmem201
Transmembrane protein 201.
    
 
 0.767
noc2l
NOC2-like nucleolar associated transcriptional repressor.
    
 
 0.710
ndufaf7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
      
 0.637
RNF223
Ring finger protein 223.
    
 0.577
mdh1b
Malate dehydrogenase 1B, NAD (soluble).
    
 
 0.566
DOK7
Docking protein 7.
    
 
 0.542
LOC103467195
Solute carrier family 2 member 5; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.541
spsb4
SplA/ryanodine receptor domain and SOCS box containing 4a.
      
 0.536
rnf141
Ring finger protein 141.
    
 
 0.516
LOC103482406
Uncharacterized protein.
  
 
  0.497
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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