Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (830 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
   
 0.998
syf2
SYF2 pre-mRNA-splicing factor.
    
  0.989
cwf19l2
CWF19 like cell cycle control factor 2.
   
 0.989
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.986
ccdc12
Coiled-coil domain containing 12.
    
  0.979
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.977
xab2
XPA binding protein 2.
   
 0.972
LOC103474722
Uncharacterized protein.
    
   0.962
cwf19l1
CWF19 like cell cycle control factor 1.
   
 0.961
LOC103462782
GC-rich sequence DNA-binding factor 2.
   
 0.960
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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