STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpnmbGlycoprotein (transmembrane) nmb. (624 aa)    
Predicted Functional Partners:
dct
Dopachrome tautomerase.
     
 0.893
LOC103471128
Heparin-binding EGF-like growth factor a.
     
 0.794
LOC103477848
Apolipoprotein Eb.
   
  
 0.702
LOC103474698
Purinergic receptor P2Y12.
      
 0.691
LOC103473739
Transmembrane protein 119b.
      
 0.686
TPPP
Tubulin polymerization promoting protein.
      
 0.649
LOC103463734
Interleukin 12 receptor, beta 2a.
  
  
 0.632
LOC103461379
Galectin.
   
 
 0.620
LOC103457880
Galectin.
   
 
 0.620
LOC103458310
Galectin.
   
 
 0.620
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.