STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ofd1OFD1 centriole and centriolar satellite protein. (978 aa)    
Predicted Functional Partners:
fopnl
Fgfr1op N-terminal like.
   
 
 0.976
pcm1
Pericentriolar material 1.
   
 
 0.972
kiaa0753
Uncharacterized protein.
   
 
 0.951
cep131
Centrosomal protein 131.
    
 0.907
mcph1
Microcephalin 1.
    
 0.774
ift88
Intraflagellar transport 88 homolog.
    
 
 0.767
clg16h8orf37
Uncharacterized protein.
      
 0.758
arl13b
ADP-ribosylation factor-like 13b.
   
 
 0.739
cep63
Centrosomal protein 63.
   
 
 0.738
c2cd3
C2 domain containing 3 centriole elongation regulator.
    
 0.734
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.