STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ofd1OFD1 centriole and centriolar satellite protein. (978 aa)    
Predicted Functional Partners:
pcm1
Pericentriolar material 1.
   
 
 0.817
PLK1
Serine/threonine-protein kinase PLK.
   
 0.645
plk3
Serine/threonine-protein kinase PLK.
   
 0.645
plk2
Serine/threonine-protein kinase PLK.
   
 0.645
CCNO
Cyclin O; Belongs to the cyclin family.
   
 0.610
kiaa0753
Uncharacterized protein.
    
 
 0.600
fopnl
Fgfr1op N-terminal like.
   
 
 0.598
arl13b
ADP-ribosylation factor-like 13b.
   
 
 0.598
c2cd3
C2 domain containing 3 centriole elongation regulator.
    
 0.591
rpgr
Uncharacterized protein.
   
 0.590
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.