STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466252Dickkopf WNT signaling pathway inhibitor 3b. (257 aa)    
Predicted Functional Partners:
LOC103476799
Dickkopf WNT signaling pathway inhibitor 1a.
      
 0.651
sfrp5
Secreted frizzled-related protein 5.
    
 0.599
sfrp1
Secreted frizzled-related protein 1a.
    
 0.598
wnt6
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 
 0.590
bmpr1a
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.560
dkk2
Dickkopf WNT signaling pathway inhibitor 2.
      
 0.542
LOC103480964
Dickkopf_N domain-containing protein.
      
 0.542
kremen1
Kringle containing transmembrane protein 1.
    
 0.479
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
 0.446
bambi
BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a.
      
 0.428
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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