STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472224Insulin-like growth factor 2 mRNA binding protein 3. (608 aa)    
Predicted Functional Partners:
LOC103468924
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
  
 0.599
sirt2
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.
      
 0.597
ENSPREP00000025121
Sirtuin 3.
      
 0.597
sirt1
Sirtuin 1.
      
 0.592
Sirt7
Uncharacterized protein.
      
 0.591
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
   
 
 0.550
LOC103457646
Lin-28 homolog B (C. elegans).
   
 
 0.449
LOC103473856
Uncharacterized protein; Belongs to the synuclein family.
      
 0.403
LOC103465959
Synaptic vesicle glycoprotein 2.
      
 0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.