STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)    
Predicted Functional Partners:
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.996
snw1
SNW domain containing 1.
    
 0.995
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.994
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.987
prpf8
Pre-mRNA processing factor 8.
   
 0.974
ppwd1
Peptidylprolyl isomerase domain and WD repeat containing 1.
  
0.972
cwc22
CWC22 spliceosome associated protein homolog.
   
 0.965
slu7
SLU7 homolog, splicing factor.
    
 0.965
prpf19
Pre-mRNA processing factor 19.
    
 0.964
srrm1
Serine/arginine repetitive matrix 1.
   
 0.964
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.