STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000002466GAS domain-containing protein. (320 aa)    
Predicted Functional Partners:
dnali1
Dynein, axonemal, light intermediate chain 1.
    
 
 0.604
coasy
CoA synthase.
    
 
 0.588
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.505
rsph1
Uncharacterized protein.
    
 
 0.491
dnai2
Dynein, axonemal, intermediate chain 2b.
      
 0.474
LOC103464219
Radial spoke head component 4A.
      
 0.468
armc4
Armadillo repeat containing 4.
    
 
 0.466
iqub
IQ motif and ubiquitin domain containing.
   
 
 0.462
ppcdc
Phosphopantothenoylcysteine decarboxylase.
     
 0.457
mns1
Meiosis-specific nuclear structural 1.
  
 
 0.457
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.