STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
trappc2Trafficking protein particle complex 2. (141 aa)    
Predicted Functional Partners:
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.998
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.998
trappc6a
Trafficking protein particle complex 6b-like.
   
 0.998
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.998
trappc2l
Trafficking protein particle complex 2-like.
   
 0.998
trappc8
Trafficking protein particle complex 8.
    
 0.996
trappc12
Trafficking protein particle complex 12.
    
 0.994
trappc11
Trafficking protein particle complex 11.
    
 0.994
trappc9
Trafficking protein particle complex 9.
    
 0.993
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.991
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.