STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460504Galanin receptor 1b; Belongs to the G-protein coupled receptor 1 family. (344 aa)    
Predicted Functional Partners:
gal
Galanin/GMAP prepropeptide.
    
 0.998
ENSPREP00000017976
Spexin hormone.
   
 0.957
Vstm5
Uncharacterized protein.
   
  
 0.555
POMC
Proopiomelanocortin.
   
 0.544
LOC103472811
Uncharacterized protein.
   
 0.544
NPBWR1
Neuropeptides B and W receptor 1; Belongs to the G-protein coupled receptor 1 family.
   
 
  0.526
apln
Apelin.
    
 0.517
agt
Angiotensinogen; Belongs to the serpin family.
    
  0.516
LOC103462492
Zgc:162592; Belongs to the G-protein coupled receptor 1 family.
    
 0.516
agtr2
Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family.
     
  0.514
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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