Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
rnps1RNA binding protein S1, serine-rich domain. (280 aa)    
Predicted Functional Partners:
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 0.999
pnn
Pinin, desmosome associated protein.
   
 0.999
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.999
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.998
srrm1
Serine/arginine repetitive matrix 1.
   
 0.997
rbm8a
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.994
LOC103469127
Aly/REF export factor.
   
 0.986
LOC103474154
Serine and arginine rich splicing factor 1a.
   
 0.980
LOC103475485
Uncharacterized protein.
   
 0.980
LOC103475989
Apoptotic chromatin condensation inducer 1b.
   
 0.977
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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