STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
thoc5THO complex 5. (683 aa)    
Predicted Functional Partners:
thoc1
THO complex 1.
   
 0.999
thoc6
THO complex 6.
   
 0.999
thoc3
THO complex 3.
   
 0.999
thoc7
THO complex 7.
   
 0.999
thoc2
THO complex 2.
   
 0.999
LOC103469127
Aly/REF export factor.
   
 0.994
chtop
Chromatin target of PRMT1a.
   
 0.985
alyref
RRM domain-containing protein.
   
 0.954
nxf1
Zgc:153681.
    
 0.949
DDX39A
DExD-box helicase 39A.
   
 0.944
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.