STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480858Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
set
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.771
LOC103474061
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.771
LOC103467702
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.677
dmap1
DNA methyltransferase 1 associated protein 1.
    
 
 0.642
vps72
Vacuolar protein sorting 72 homolog a.
    
 
 0.631
LOC103460623
Prothymosin alpha b.
   
 
 0.604
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
  
 0.599
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.594
LOC103470692
Histone H2A; Belongs to the histone H2A family.
   
 
 0.594
ino80
INO80 complex ATPase subunit.
    
 
 0.571
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.