STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480858Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.629
LOC103470692
Histone H2A; Belongs to the histone H2A family.
   
 
 0.629
set
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.612
LOC103474061
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.612
LOC103467702
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.568
LOC103477318
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.529
xpo1
Exportin 1 (CRM1 homolog, yeast) a.
   
 0.529
LOC103463278
ELAV-like protein; Belongs to the RRM elav family.
   
 0.471
LOC103458435
ELAV-like protein; Belongs to the RRM elav family.
   
 0.471
iscu
Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
 
      0.458
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.