STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000002566Thymosin beta 5. (36 aa)    
Predicted Functional Partners:
LOC103462148
Uncharacterized protein.
   
 0.924
actb
Uncharacterized protein.
   
 0.924
LOC103474715
Thymosin beta; Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization. Belongs to the thymosin beta family.
  
  
 
0.901
tpt1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
   
    0.588
RPL5
Ribosomal protein L5.
   
   0.495
RPL5-2
Ribosomal protein L5b.
   
   0.495
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  
 0.480
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
  
 0.474
LOC103480264
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  
 0.422
LOC103479056
Profilin; Belongs to the profilin family.
   
 
 0.408
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.