STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nt5dc15'-nucleotidase domain containing 1. (459 aa)    
Predicted Functional Partners:
LOC103479743
Cytohesin 4b.
      
 0.758
dpy19l1
Dpy-19-like 1, like (H. sapiens).
      
 0.724
LOC103458742
Tyrosine-protein kinase.
      
 0.670
CPQ
Carboxypeptidase Q.
      
 0.670
abhd10
Transgelin 3b.
      
 0.670
col8a2
Collagen, type VIII, alpha 2.
      
 0.670
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
      
 0.616
armc2
Armadillo repeat containing 2.
      
 0.605
ENSPREP00000007296
Uncharacterized protein.
      
 0.605
p4htm
Prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum).
      
 0.603
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.