Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rimbp2RIMS binding protein 2. (1514 aa)    
Predicted Functional Partners:
LOC103472577
Uncharacterized protein.
    
 0.956
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.956
rims1
Regulating synaptic membrane exocytosis 1a.
    
 0.778
LOC103472178
Regulating synaptic membrane exocytosis 3.
    
 0.778
LOC103464595
Translocator protein.
    
 0.651
LOC103464594
Translocator protein.
    
 0.651
LOC103469794
Uncharacterized protein.
   
 0.599
Unc13b
Uncharacterized protein.
   
 0.599
UNC13C
Unc-13 homolog C.
   
 0.599
ENSPREP00000008454
C2 domain-containing protein.
   
 0.599
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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