STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sugt1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone. (323 aa)    
Predicted Functional Partners:
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.993
LOC103457917
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.992
nod1
Nucleotide-binding oligomerization domain containing 1.
    
 0.962
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 
 0.960
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
   
 0.933
trap1
TNF receptor-associated protein 1.
   
 0.865
tsc1
TSC complex subunit 1b.
   
 0.865
LOC103479552
PH domain and leucine rich repeat protein phosphatase 1.
    
 
 0.864
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2.
    
 
 0.864
LOC103480390
Zgc:92429.
   
 
 0.857
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.