STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000002720Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
ENSPREP00000002434
Uncharacterized protein.
   
 
 0.935
LOC103457799
Uncharacterized protein.
   
 
 0.664
igf1
Insulin-like growth factor 1.
      
 0.643
fcer1g
Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.
   
 0.622
ENSPREP00000001257
Uncharacterized protein.
   
 0.622
LOC103477977
Uncharacterized protein.
    
 0.585
ptprc
Protein tyrosine phosphatase receptor type C.
   
 0.471
ENSPREP00000024881
IGv domain-containing protein.
    
 0.466
syk
Tyrosine-protein kinase.
   
 0.442
LOC103468233
Tyrosine-protein kinase.
   
 0.442
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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