STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
poglut3Protein O-glucosyltransferase 3. (528 aa)    
Predicted Functional Partners:
pigs
Phosphatidylinositol glycan anchor biosynthesis, class S.
   
  
 0.587
dgke
Diacylglycerol kinase.
      
 0.580
ndrg1
Uncharacterized protein.
      
 0.580
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.580
pofut1
Protein O-fucosyltransferase 1.
   
 
 0.561
sptlc1
Serine palmitoyltransferase, long chain base subunit 1.
   
  
 0.524
itpr2
Inositol 1,4,5-trisphosphate receptor, type 2.
      
 0.515
plrg1
Pleiotropic regulator 1.
      
 0.503
lzic
Leucine zipper and CTNNBIP1 domain containing.
      
 0.472
gins3
GINS complex subunit 3.
      
 0.469
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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