Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dseDermatan sulfate epimerase. (952 aa)    
Predicted Functional Partners:
DSEL
Dermatan sulfate epimerase like a.
  
  
 
0.902
b3galt6
Hexosyltransferase.
      
 0.724
rev1
REV1 DNA directed polymerase.
      
 0.706
chst11
Carbohydrate sulfotransferase.
      
 0.675
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
      
 0.670
ENSPREP00000021383
GUCT domain-containing protein.
      
 0.665
chsy1
Hexosyltransferase.
      
 0.659
stox1
Storkhead box 1.
      
 0.653
csgalnact2
Hexosyltransferase.
      
 0.613
ncan
Neurocan b.
     
 0.607
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.