STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000002756Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
ENSPREP00000012349
Amyloid beta (A4) precursor protein-binding, family B, member 2b.
 
     0.919
app
Amyloid beta (A4) precursor protein a.
    
 0.643
LOC103459816
Amyloid beta (A4) precursor protein b.
    
 0.643
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.631
LOC103465559
Family with sequence similarity 83 member D.
   
 
 0.601
pank4
Pantothenate kinase.
    
 
 0.600
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
      
 0.595
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
 0.578
ENSPREP00000015401
CENP-F_N domain-containing protein.
   
 
 0.570
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.550
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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