STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
il1r2Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
LOC103470686
Interleukin-1.
   
 0.997
LOC103460066
Uncharacterized protein.
   
 
 0.953
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
      
 0.550
LOC103478314
Zmp:0000000936.
  
 
 0.515
LOC103478334
Zmp:0000000936.
  
 
 0.506
map3k8
Mitogen-activated protein kinase kinase kinase 8.
   
  
 0.502
ENSPREP00000013211
Uncharacterized protein.
  
 
 
 0.496
tnfsf13b
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
    
 
 0.487
il10
Interleukin 10.
   
 
 0.463
LOC103474821
Uncharacterized protein.
   
 0.454
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.