STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kbtbd13Kelch repeat and BTB (POZ) domain containing 13. (489 aa)    
Predicted Functional Partners:
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.725
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.725
LOC103471028
COMM domain containing 5.
  
  
  0.664
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.603
neb
Nebulin.
   
  
 0.581
commd9
COMM domain containing 9.
     
  0.575
COMMD6
COMM domain containing 6.
     
  0.565
commd8
COMM domain containing 8.
     
  0.565
commd7
COMM domain containing 7.
     
  0.565
LOC103475981
Ubiquitin-like domain-containing protein.
     
 0.537
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.