STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpl28Ribosomal protein L28. (137 aa)    
Predicted Functional Partners:
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.999
rpl35a
Ribosomal protein L35a.
   
 0.999
rplp0
Ribosomal protein, large, P0.
   
 0.999
rps5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.999
rpl37
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.999
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
rpl8
Ribosomal protein L8.
   
 0.999
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
ENSPREP00000010553
Ribosomal protein L18.
   
 0.999
rpl9
Ribosomal protein L9.
   
 0.999
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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