STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103463814Short coiled-coil protein a. (79 aa)    
Predicted Functional Partners:
fez1
Fasciculation and elongation protein zeta 1 (zygin I).
   
 
 0.868
LOC103478428
Si:dkey-288i20.2.
   
 
 0.818
LOC103457696
Si:ch211-57i17.1.
   
 
 0.818
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
   0.792
LOC103474694
Uncharacterized protein.
    
   0.711
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.706
ENSPREP00000030890
Uncharacterized protein.
   
 
 0.649
prpf38b
Uncharacterized protein.
      
 0.596
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
      
 0.593
arfrp1
ADP-ribosylation factor related protein 1.
      
 0.583
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.