STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
piwil1Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family. (840 aa)    
Predicted Functional Partners:
LOC103457790
Tudor domain containing 6.
   
 0.841
tdrd1
Tudor domain containing 1.
   
 0.838
ENSPREP00000026261
Uncharacterized protein.
   
 0.793
tdrd5
Uncharacterized protein.
   
 0.754
tdrkh
Tudor and KH domain containing.
   
 0.752
ENSPREP00000022562
Tudor domain containing 9.
   
 0.733
rnf17
Ring finger protein 17.
   
 0.681
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 0.642
tdrd7
Tudor domain containing 7 a.
   
 0.615
LOC103480553
Tudor domain containing 7 b.
   
 0.615
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.