STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478940ETS domain-containing protein. (445 aa)    
Predicted Functional Partners:
runx3
Runt-related transcription factor.
    
 0.636
LOC103457845
Runt-related transcription factor.
    
 0.636
LOC103477443
Runt-related transcription factor.
    
 0.636
guf1
Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
      
 0.616
med23
Mediator complex subunit 23.
   
 
 0.596
LOC103476608
Runt domain-containing protein.
    
 0.580
rfx5
Regulatory factor X, 5.
      
 0.571
cbfb
Core-binding factor subunit beta.
   
 
  0.539
eef1d
Eukaryotic translation elongation factor 1 delta.
      
 0.467
LOC103479844
Eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein); Belongs to the EF-1-beta/EF-1-delta family.
      
 0.467
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.