STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480164Fragile X mental retardation, autosomal homolog 2. (656 aa)    
Predicted Functional Partners:
LOC103470899
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 0.969
LOC103461055
Fragile X mental retardation 1.
  
 
0.954
tdrd3
Tudor domain containing 3.
    
 
 0.639
mpdu1
Mannose-P-dolichol utilization defect 1b.
      
 0.630
LOC103463911
Cytoplasmic FMR1 interacting protein 1.
    
 
 0.590
fmr1
Fragile X mental retardation 1.
  
 
 
0.555
map1b
Microtubule-associated protein 1B.
    
 
 0.555
nr1i2
Nuclear receptor subfamily 1, group I, member 2.
    
 
 0.549
rmi1
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
    
 
 0.515
LOC103479027
SERPINE1 mRNA binding protein 1b.
    
 
 0.465
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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