STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPFIBP2Uncharacterized protein. (1018 aa)    
Predicted Functional Partners:
tm7sf3
Transmembrane 7 superfamily member 3.
      
 0.458
ppfia4
PTPRF interacting protein alpha 4.
   
 0.451
LOC103468986
PTPRF interacting protein alpha 3.
   
 0.451
LOC103463013
PTPRF interacting protein alpha 1.
   
 0.451
PPFIA3
PTPRF interacting protein alpha 3.
   
 0.451
ppfia2
PTPRF interacting protein alpha 2.
   
 0.451
LOC103463439
Protein tyrosine phosphatase receptor type Sa.
     
 0.409
PTPRD
Uncharacterized protein.
     
 0.409
ptprf
Protein tyrosine phosphatase receptor type Fb.
     
 0.409
LOC103479283
Protein tyrosine phosphatase receptor type Sa.
     
 0.409
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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