STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478942Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (178 aa)    
Predicted Functional Partners:
cog3
Component of oligomeric golgi complex 3.
 
    
 0.682
pipox
Pipecolic acid oxidase.
      
 0.524
alg8
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.503
rbmx
RNA binding motif protein X-linked.
      
 0.497
snip1
Smad nuclear interacting protein.
      
 0.472
gpr101
G protein-coupled receptor 101; Belongs to the G-protein coupled receptor 1 family.
      
 0.471
LOC103462136
Secretory carrier-associated membrane protein.
      
 0.463
SCAMP2
Secretory carrier-associated membrane protein.
      
 0.463
LOC103471023
RAB33A, member RAS oncogene family.
      
 0.447
scai
Suppressor of cancer cell invasion.
      
 0.445
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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