STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000002902Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (296 aa)    
Predicted Functional Partners:
ENSPREP00000002868
Uncharacterized protein.
 
      0.773
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
   0.564
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.559
LOC103469439
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.559
snrnp70
Small nuclear ribonucleoprotein 70 (U1).
   
 
 0.525
ENSPREP00000005097
Si:dkey-8e10.3.
      
 0.503
LOC103461139
RNA binding motif protein 39b.
    
 
 0.499
rbm39
Uncharacterized protein.
    
 
 0.499
sf1
Splicing factor 1.
   
 
 0.485
LOC103471249
CDC-like kinase 4a.
   
 
 0.460
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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