STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467740Nucleolar protein 4-like a. (691 aa)    
Predicted Functional Partners:
ENSPREP00000034346
Uncharacterized protein.
    
   0.703
ska3
Spindle and kinetochore associated complex subunit 3.
    
   0.562
fbxl13
F-box and leucine-rich repeat protein 13.
   
 
 0.552
LOC103473696
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.483
commd7
COMM domain containing 7.
      
 0.461
fam185a
Family with sequence similarity 185 member A.
      
 0.453
ankrd9
Ankyrin repeat domain 9.
     
 0.434
nptx2
Neuronal pentraxin 2a.
   
  
 0.419
LOC103467747
Cdk5 and Abl enzyme substrate 2a.
      
 0.413
LOC103467745
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.413
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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