LOC103468055 protein (Poecilia reticulata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

LOC103468055

Uncharacterized protein. (1292 aa)

Predicted Functional Partners:

cntn2

0.967

ncam2

0.940

ncam1

0.938

LOC103478313

0.938

LOC103476322

0.938

l1cam

0.903

nrp1

0.678

fam151b

0.622

LOC103466916

0.590

CNTN1

0.556

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNTN1	LOC103468055	ENSPREP00000013907	ENSPREP00000002930	Contactin 1.	Uncharacterized protein.	0.556
CNTN1	LOC103478313	ENSPREP00000013907	ENSPREP00000020122	Contactin 1.	Neural cell adhesion molecule 3.	0.403
CNTN1	fam151b	ENSPREP00000013907	ENSPREP00000017781	Contactin 1.	Family with sequence similarity 151 member B.	0.423
CNTN1	l1cam	ENSPREP00000013907	ENSPREP00000032193	Contactin 1.	L1 cell adhesion molecule, paralog a.	0.556
CNTN1	nrp1	ENSPREP00000013907	ENSPREP00000008824	Contactin 1.	Neuropilin; Belongs to the neuropilin family.	0.472
LOC103466916	LOC103468055	ENSPREP00000006482	ENSPREP00000002930	Syndecan binding protein (syntenin) 2.	Uncharacterized protein.	0.590
LOC103466916	l1cam	ENSPREP00000006482	ENSPREP00000032193	Syndecan binding protein (syntenin) 2.	L1 cell adhesion molecule, paralog a.	0.590
LOC103468055	CNTN1	ENSPREP00000002930	ENSPREP00000013907	Uncharacterized protein.	Contactin 1.	0.556
LOC103468055	LOC103466916	ENSPREP00000002930	ENSPREP00000006482	Uncharacterized protein.	Syndecan binding protein (syntenin) 2.	0.590
LOC103468055	LOC103476322	ENSPREP00000002930	ENSPREP00000023026	Uncharacterized protein.	Neural cell adhesion molecule 1a.	0.938
LOC103468055	LOC103478313	ENSPREP00000002930	ENSPREP00000020122	Uncharacterized protein.	Neural cell adhesion molecule 3.	0.938
LOC103468055	cntn2	ENSPREP00000002930	ENSPREP00000029196	Uncharacterized protein.	Contactin 2.	0.967
LOC103468055	fam151b	ENSPREP00000002930	ENSPREP00000017781	Uncharacterized protein.	Family with sequence similarity 151 member B.	0.622
LOC103468055	l1cam	ENSPREP00000002930	ENSPREP00000032193	Uncharacterized protein.	L1 cell adhesion molecule, paralog a.	0.903
LOC103468055	ncam1	ENSPREP00000002930	ENSPREP00000016214	Uncharacterized protein.	Neural cell adhesion molecule 1b.	0.938
LOC103468055	ncam2	ENSPREP00000002930	ENSPREP00000009341	Uncharacterized protein.	Zgc:152904.	0.940
LOC103468055	nrp1	ENSPREP00000002930	ENSPREP00000008824	Uncharacterized protein.	Neuropilin; Belongs to the neuropilin family.	0.678
LOC103476322	LOC103468055	ENSPREP00000023026	ENSPREP00000002930	Neural cell adhesion molecule 1a.	Uncharacterized protein.	0.938
LOC103476322	LOC103478313	ENSPREP00000023026	ENSPREP00000020122	Neural cell adhesion molecule 1a.	Neural cell adhesion molecule 3.	0.900
LOC103476322	cntn2	ENSPREP00000023026	ENSPREP00000029196	Neural cell adhesion molecule 1a.	Contactin 2.	0.622