STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dlx6Distal-less homeobox 6a. (246 aa)    
Predicted Functional Partners:
dlx5
Distal-less homeobox 5a.
   
 
 0.866
hand2
Heart and neural crest derivatives expressed 2.
    
 
 0.598
edn1
Endothelin 1.
      
 0.565
Fras1
Uncharacterized protein.
   
  
 0.541
bmp4
Bone morphogenetic protein 4.
     
 0.541
hopx
HOP homeobox.
     
 0.503
mecp2
Methyl CpG binding protein 2.
      
 0.503
LOC103471340
Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.
      
 0.503
LOC103476521
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.500
EDNRA
Endothelin receptor type A; Belongs to the G-protein coupled receptor 1 family.
      
 0.477
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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