Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472233Si:dkey-220f10.4; Belongs to the TUB family. (328 aa)    
Predicted Functional Partners:
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.834
IFT122
Intraflagellar transport 122.
    
 0.809
wdr19
WD repeat domain 19.
    
 0.795
ttc21b
Tetratricopeptide repeat domain 21B.
    
 0.738
wdr35
WD repeat-containing protein 35.
    
 0.715
gpr161
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
    
 0.612
IFT43
Intraflagellar transport 43.
    
 
 0.569
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
   0.560
ankrd54
Ankyrin repeat domain 54.
    
   0.513
tbc1d5
TBC1 domain family, member 5.
    
 
 0.507
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.