STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468058Natriuretic peptide A-like. (129 aa)    
Predicted Functional Partners:
LOC103478011
Wu:fj39g12.
     
 0.957
nppc
Natriuretic peptide C.
     
 0.951
npr3
Natriuretic peptide receptor 3.
     
 0.938
LOC103473991
Guanylate cyclase.
     
 0.911
LOC103468057
Natriuretic peptide B.
      
 0.658
LOC103470919
SH2 domain containing 1A duplicate b.
      
 0.481
npr1
Guanylate cyclase.
      
 0.472
ptpn7
Uncharacterized protein.
      
 0.409
Ptprr
Protein tyrosine phosphatase receptor type R.
      
 0.409
wdr45
WD repeat domain 45.
      
 0.409
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.