STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc39a14Solute carrier family 39 member 14. (509 aa)    
Predicted Functional Partners:
LOC103458197
Solute carrier family 39 member 8.
  
  
 
0.903
slc30a6
Solute carrier family 30 member 6.
  
 0.685
slc30a4
Solute carrier family 30 member 4.
   
 0.682
LOC103474271
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
  
 0.651
Slc30a1
Uncharacterized protein.
  
 0.608
prpf3
PRP3 pre-mRNA processing factor 3 homolog (yeast).
 
 
    0.504
slc30a3
Solute carrier family 30 member 2.
    
 
 0.504
Slc39a9
Solute carrier family 39 member 9.
    
 
 0.485
s100z
Protein S100; Belongs to the S-100 family.
    
 0.477
rnf128
RING-type domain-containing protein.
      
 0.472
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.