STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ascc2Activating signal cointegrator 1 complex subunit 2. (761 aa)    
Predicted Functional Partners:
trip4
Thyroid hormone receptor interactor 4.
   
 0.999
ascc3
Activating signal cointegrator 1 complex subunit 3.
    
 0.999
ascc1
Activating signal cointegrator 1 complex subunit 1.
    
 0.998
hfm1
Helicase for meiosis 1.
    
 0.941
akap7
Uncharacterized protein.
    
 0.857
znf598
Zinc finger protein 598.
    
 0.817
ubb
Uncharacterized protein.
   
  0.806
LOC103473189
Uncharacterized protein.
   
  0.806
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.805
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
 0.790
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.