Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
epg5Ectopic P-granules autophagy protein 5 homolog (C. elegans). (2575 aa)    
Predicted Functional Partners:
gabarapl2
GABA(A) receptor-associated protein like 2.
    
 0.941
gabarap
GABA(A) receptor-associated protein b.
    
 0.941
Map1lc3b
Microtubule-associated protein 1 light chain 3 beta.
    
 0.935
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.935
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.919
LOC103478027
Zgc:92606.
    
 0.919
LOC103471419
Microtubule-associated protein 1 light chain 3 gamma, like.
    
 0.919
RAB7A
RAB7A, member RAS oncogene family.
     
 0.904
LOC103465062
RAB7a, member RAS oncogene family.
     
 0.904
LOC103465551
Si:dkey-13a21.4.
     
  0.900
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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