STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIG4FIG4 phosphoinositide 5-phosphatase. (901 aa)    
Predicted Functional Partners:
pikfyve
Phosphoinositide kinase, FYVE finger containing.
    
 0.999
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 
 0.943
mtm1
Myotubularin 1.
     
 0.935
mtmr2
Myotubularin related protein 2.
     
 0.935
LOC103473187
Myotubularin related protein 7b.
   
 
 0.927
mtmr6
Myotubularin related protein 6.
   
 
 0.927
mtmr7
Myotubularin related protein 7a.
   
 
 0.927
MTMR4
Myotubularin related protein 4.
     
 0.920
mtmr3
Myotubularin related protein 3.
     
 0.920
mtmr14
Myotubularin related protein 14.
   
 
 0.915
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.