STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FIG4FIG4 phosphoinositide 5-phosphatase. (901 aa)    
Predicted Functional Partners:
pikfyve
Phosphoinositide kinase, FYVE finger containing.
    
 0.999
LOC103480150
Myotubularin related protein 1a.
     
 0.947
mtm1
Myotubularin 1.
     
 0.947
mtmr2
Myotubularin related protein 2.
     
 0.947
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 
 0.941
mtmr14
Myotubularin related protein 14.
   
 
 0.927
LOC103473187
Myotubularin related protein 7b.
     
 0.921
mtmr6
Myotubularin related protein 6.
     
 0.921
mtmr7
Myotubularin related protein 7a.
     
 0.921
MTMR4
Myotubularin related protein 4.
     
 0.920
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.