STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466261BTB (POZ) domain containing 10a. (570 aa)    
Predicted Functional Partners:
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.656
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 
 0.656
sqor
Sulfide quinone oxidoreductase.
      
 0.599
smpdl3a
Sphingomyelin phosphodiesterase, acid-like 3A.
      
 0.599
LOC103467548
Potassium channel tetramerization domain containing 6b.
      
 0.535
klhl31
Kelch-like family member 31.
   
  
 0.524
kctd7
Potassium channel tetramerization domain containing 7.
      
 0.520
kctd9
Potassium channel tetramerization domain containing 9a.
      
 0.517
supt6h
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
      
 0.489
hectd1
HECT domain containing 1.
    
   0.463
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.