STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464592Ubiquinol-cytochrome c reductase complex assembly factor 2. (130 aa)    
Predicted Functional Partners:
LOC103476625
Cytochrome c oxidase assembly factor COX20.
    
 
 0.630
Naa38
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
   
    0.530
ndufaf2
NADH:ubiquinone oxidoreductase complex assembly factor 2.
   
  
 0.471
timm8b
Translocase of inner mitochondrial membrane 8 homolog B (yeast); Belongs to the small Tim family.
   
  
 0.446
ndufa7
NADH:ubiquinone oxidoreductase subunit A7.
   
 
 0.444
LOC103479449
Uncharacterized protein.
   
  
 0.441
fam83a
FAM83 domain-containing protein.
    
 
 0.437
LOC103464266
Ubiquinol-cytochrome c reductase complex assembly factor 1.
    
 
 0.437
fam83c
Family with sequence similarity 83 member C.
    
 
 0.437
sdhaf4
Succinate dehydrogenase complex assembly factor 4.
   
  
 0.412
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.