STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467735DnaJ (Hsp40) homolog, subfamily C, member 5aa. (199 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.733
HSPA2-2
Heat shock protein family A (Hsp70) member 2; Belongs to the heat shock protein 70 family.
 
 0.731
HSPA2
Heat shock protein family A (Hsp70) member 2; Belongs to the heat shock protein 70 family.
 
 0.730
LOC103467171
Si:ch211-199o1.2; Belongs to the heat shock protein 70 family.
 
 0.730
LOC103474213
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.728
LOC103478507
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.726
HSPA8
Heat shock protein 8; Belongs to the heat shock protein 70 family.
 
 0.725
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
 
 0.717
tfip11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.671
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.665
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.