STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003070Immunoglobin superfamily, member 21b. (481 aa)    
Predicted Functional Partners:
vps13d
Vacuolar protein sorting 13 homolog D.
      
 0.699
igsf11
Immunoglobulin superfamily member 11.
  
   
 0.551
lrmda
Leucine rich melanocyte differentiation associated.
    
 0.551
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
     
 0.542
ASTN2
Astrotactin 2.
    
 0.525
Lrrc3b
Leucine rich repeat containing 3B.
    
 0.522
LOC103464449
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
    
 
 0.517
clvs1
CRAL-TRIO domain-containing protein.
   
 
 0.515
clvs2
Clavesin 2.
   
 
 0.515
park7
Parkinson protein 7.
   
 0.513
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.