STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cntlnCentlein, centrosomal protein. (1274 aa)    
Predicted Functional Partners:
lrrc45
Leucine rich repeat containing 45.
      
 0.798
nin
Ninein (GSK3B interacting protein).
      
 0.728
LOC103478590
Speriolin_C domain-containing protein.
      
 0.720
sass6
SAS-6 centriolar assembly protein.
      
 0.660
plk4
Polo-like kinase 4 (Drosophila).
      
 0.639
LOC103463518
SPATA6 domain-containing protein.
      
 0.601
ENSPREP00000019912
SPATA6 domain-containing protein.
      
 0.601
wdr5
WD repeat domain 5.
      
 0.593
ENSPREP00000026798
Transmembrane protein 150C.
      
 0.586
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
      
 0.584
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.