STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467733MFS domain-containing protein. (456 aa)    
Predicted Functional Partners:
slc17a9
Solute carrier family 17 member 9b.
  
  
 
0.902
LOC103472577
Uncharacterized protein.
     
 0.611
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.611
LOC103481302
FRA10A associated CGG repeat 1.
      
 0.604
exosc10
Exosome component 10.
      
 0.596
LOC103476373
Solute carrier family 37 member 2.
  
   
 0.588
fbf1
Uncharacterized protein.
      
 0.586
acp5
Tartrate-resistant acid phosphatase type 5.
      
 0.515
elmod3
ELMO/CED-12 domain containing 3.
      
 0.503
Snx20
PX domain-containing protein.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.