STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000003105VWFD domain-containing protein. (233 aa)    
Predicted Functional Partners:
Otog
Uncharacterized protein.
 
 
 
0.919
LOC108166170
Uncharacterized protein.
 
 
 
0.916
ENSPREP00000020161
Uncharacterized protein.
 
 
0.916
ENSPREP00000020260
Uncharacterized protein.
 
 
0.916
LOC103466699
Uncharacterized protein.
 
 
0.904
ENSPREP00000020104
Uncharacterized protein.
 
 
 
0.903
LOC103466701
Uncharacterized protein.
 
 
 
0.902
ENSPREP00000008853
VWFD domain-containing protein.
 
     
0.900
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
    
 0.803
ENSPREP00000022646
Uncharacterized protein.
 
   
 0.780
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.