STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPOThyroid peroxidase. (522 aa)    
Predicted Functional Partners:
LOC103459397
Tyrosine hydroxylase 2.
     
 0.922
th
Tyrosine hydroxylase.
     
 0.922
got2
Aspartate aminotransferase.
    
 0.915
got1
Aspartate aminotransferase.
    
 0.913
GOT1
Aspartate aminotransferase.
    
 0.913
tyr
Tyrosinase.
    
 0.907
TYR
Tyrosinase.
    
 0.906
ddc
Dopa decarboxylase.
     
 0.905
LOC103466494
Eosinophil peroxidase.
  
  
 
0.903
LOC103480938
Amino_oxidase domain-containing protein.
     
 0.902
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.