Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
asb4Ankyrin repeat and SOCS box containing 4. (468 aa)    
Predicted Functional Partners:
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
 
 0.861
wdr6
WD repeat domain 6.
   
 
 0.756
dnajb5
J domain-containing protein.
   
  0.737
LOC103473455
Zgc:122979.
   
  0.737
cul5
Cullin 5; Belongs to the cullin family.
    
 0.713
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.713
asb6
Ankyrin repeat and SOCS box containing 6.
     
 0.634
LOC103467503
Ankyrin repeat and SOCS box containing 14b.
  
 
0.623
asb14
Ankyrin repeat and SOCS box containing 14a.
  
 
0.610
asb15
Ankyrin repeat and SOCS box containing 15b.
  
 
0.607
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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