STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb4Ankyrin repeat and SOCS box containing 4. (468 aa)    
Predicted Functional Partners:
wdr6
WD repeat domain 6.
   
 
 0.560
LOC103467503
Ankyrin repeat and SOCS box containing 14b.
  
 
0.524
commd1
Copper metabolism (Murr1) domain containing 1.
    
 0.520
asb14
Ankyrin repeat and SOCS box containing 14a.
  
 
0.507
asb15
Ankyrin repeat and SOCS box containing 15b.
  
 
0.504
LOC103469085
Fleer.
    
 0.504
ift81
Intraflagellar transport 81 homolog.
    
 0.493
asb6
Ankyrin repeat and SOCS box containing 6.
     
 0.491
cluap1
Clusterin associated protein 1.
    
 0.473
ift88
Intraflagellar transport 88 homolog.
   
 0.466
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.